mio::oseirmetapop Namespace Reference

Classes
struct	CommutingStrengths
	The commuting patterns between different Regions are modelled using a ContactMatrix of size n_regions x n_regions. More...
struct	ContactPatterns
	The contact patterns within the society are modelled using a ContactMatrix. More...
class	Model
	The Model holds the Parameters and the initial Populations for every region and defines the ordinary differential equations. More...
class	Parameters
	Parameters of the SEIR metapopulation model. More...
struct	PopulationAfterCommuting
	The number of individuals in each Region and AgeGroup if commuting was applied. More...
struct	TimeExposed
	The latent time in day unit. More...
struct	TimeInfected
	The infectious time in day unit. More...
struct	TransmissionProbabilityOnContact
	Probability of getting infected from a contact. More...

Typedefs
using	Flows = TypeList< Flow< InfectionState::Susceptible, InfectionState::Exposed >, Flow< InfectionState::Exposed, InfectionState::Infected >, Flow< InfectionState::Infected, InfectionState::Recovered > >
template<typename FP = ScalarType>
using	ParametersBase = ParameterSet< TransmissionProbabilityOnContact< FP >, TimeExposed< FP >, TimeInfected< FP >, ContactPatterns< FP >, CommutingStrengths< FP >, PopulationAfterCommuting< FP > >
using	Region = mio::regions::Region

Typedef Documentation

Flows

using mio::oseirmetapop::Flows = typedef TypeList<Flow<InfectionState::Susceptible, InfectionState::Exposed>, Flow<InfectionState::Exposed, InfectionState::Infected>, Flow<InfectionState::Infected, InfectionState::Recovered> >

ParametersBase

template<typename FP = ScalarType>

using mio::oseirmetapop::ParametersBase = typedef ParameterSet<TransmissionProbabilityOnContact<FP>, TimeExposed<FP>, TimeInfected<FP>, ContactPatterns<FP>, CommutingStrengths<FP>, PopulationAfterCommuting<FP> >

Region

using mio::oseirmetapop::Region = typedef mio::regions::Region